Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Khdc3Q9CWU5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Khdc3Q9CWU5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc3Q9CWU5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Khdc3Q9CWU5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc3Q9CWU5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Khdc3Q9CWU5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc3Q9CWU5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc3Q9CWU5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Khdc3Q9CWU5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Gm14719-201ENSMUST00000121891 340 ntBASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Khdc3Q9CWU5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Khdc3Q9CWU5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Khdc3Q9CWU5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Khdc3Q9CWU5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Khdc3Q9CWU5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Khdc3Q9CWU5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Khdc3Q9CWU5 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Khdc3Q9CWU5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Khdc3Q9CWU5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Khdc3Q9CWU5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.95□□□□□ -0.34
Khdc3Q9CWU5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms