Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Gm2451-201ENSMUST00000199447 999 ntBASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Gm10290-201ENSMUST00000200451 999 ntBASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Gm45328-201ENSMUST00000210942 917 ntBASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pfdn1Q9CWM4 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Gm9013-201ENSMUST00000132939 882 ntBASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Gm7506-201ENSMUST00000207758 815 ntBASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Gm9182-201ENSMUST00000217829 639 ntBASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.8□□□□□ -0.52
Pfdn1Q9CWM4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms