Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Syt7-205ENSMUST00000224135 1557 ntBASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Gm15460-201ENSMUST00000118147 391 ntBASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Gm27680-201ENSMUST00000184192 160 ntBASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.12□□□□□ -0.31
Rnf111Q99ML9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Gm44872-201ENSMUST00000207864 420 ntBASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Rnf111Q99ML9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf111Q99ML9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms