Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nkx6-1Q99MA9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.65□□□□□ -0.38
Nkx6-1Q99MA9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx6-1Q99MA9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx6-1Q99MA9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx6-1Q99MA9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Gm7046-201ENSMUST00000221351 977 ntBASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Nsd1-205ENSMUST00000224693 852 ntBASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx6-1Q99MA9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx6-1Q99MA9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms