Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Scrt1Q99M85 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.85□□□□□ -0.51
Scrt1Q99M85 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Gm24196-201ENSMUST00000179161 110 ntBASIC11.85□□□□□ -0.51
Scrt1Q99M85 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.85□□□□□ -0.51
Scrt1Q99M85 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.85□□□□□ -0.51
Scrt1Q99M85 Gm43822-201ENSMUST00000200285 476 ntBASIC11.85□□□□□ -0.51
Scrt1Q99M85 Gm43818-201ENSMUST00000200605 466 ntBASIC11.85□□□□□ -0.51
Scrt1Q99M85 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Gm5425-201ENSMUST00000214125 459 ntBASIC11.85□□□□□ -0.51
Scrt1Q99M85 Gm45930-201ENSMUST00000221330 292 ntBASIC11.85□□□□□ -0.51
Scrt1Q99M85 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.85□□□□□ -0.51
Scrt1Q99M85 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scrt1Q99M85 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Gm13612-201ENSMUST00000119276 390 ntBASIC11.84□□□□□ -0.51
Scrt1Q99M85 Gm13350-201ENSMUST00000120519 479 ntBASIC11.84□□□□□ -0.51
Scrt1Q99M85 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.84□□□□□ -0.51
Scrt1Q99M85 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.84□□□□□ -0.51
Scrt1Q99M85 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Gm26464-201ENSMUST00000157094 305 ntBASIC11.84□□□□□ -0.51
Scrt1Q99M85 Gm22331-201ENSMUST00000158066 136 ntBASIC11.84□□□□□ -0.51
Scrt1Q99M85 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.84□□□□□ -0.51
Scrt1Q99M85 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Scrt1Q99M85 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scrt1Q99M85 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Scrt1Q99M85 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Scrt1Q99M85 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Gm11803-201ENSMUST00000119966 444 ntBASIC11.83□□□□□ -0.52
Scrt1Q99M85 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.83□□□□□ -0.52
Scrt1Q99M85 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.83□□□□□ -0.52
Scrt1Q99M85 Mir3547-201ENSMUST00000175461 88 ntBASIC11.83□□□□□ -0.52
Scrt1Q99M85 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.83□□□□□ -0.52
Scrt1Q99M85 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.83□□□□□ -0.52
Scrt1Q99M85 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scrt1Q99M85 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms