Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Gm24420-201ENSMUST00000176676 59 ntBASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk5rap3Q99LM2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Gm5425-201ENSMUST00000214125 459 ntBASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk5rap3Q99LM2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Gm13859-201ENSMUST00000119936 1423 ntBASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Gm6912-201ENSMUST00000117218 544 ntBASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Gm14452-201ENSMUST00000118680 1632 ntBASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Gm5320-201ENSMUST00000207163 1519 ntBASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdk5rap3Q99LM2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdk5rap3Q99LM2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms