Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd2Q99JR8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Gm11591-201ENSMUST00000120063 702 ntBASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Smarcd2Q99JR8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcd2Q99JR8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcd2Q99JR8 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.58□□□□□ -0.23
Smarcd2Q99JR8 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcd2Q99JR8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Gm16479-201ENSMUST00000121706 932 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Gm18056-201ENSMUST00000207670 568 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Gm18061-201ENSMUST00000208350 562 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Gm18063-201ENSMUST00000208529 568 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Gm18052-201ENSMUST00000208750 559 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Gm8227-201ENSMUST00000223306 571 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd2Q99JR8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd2Q99JR8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms