Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Gm27892-201ENSMUST00000185017 106 ntBASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha2Q91Y17 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Gm11478-201ENSMUST00000117851 599 ntBASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Gm45841-201ENSMUST00000207700 164 ntBASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Gm10012-201ENSMUST00000078252 192 ntBASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Gm5356-201ENSMUST00000093326 615 ntBASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha2Q91Y17 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha2Q91Y17 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms