Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Gm15806-201ENSMUST00000120696 955 ntBASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Gm9002-201ENSMUST00000178437 499 ntBASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb2Q91Y00 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Gm15678-201ENSMUST00000117573 960 ntBASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Gm38144-201ENSMUST00000192790 465 ntBASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Gm6983-201ENSMUST00000214912 628 ntBASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb2Q91Y00 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.33□□□□□ -0.11
Pcdhb2Q91Y00 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.33□□□□□ -0.11
Pcdhb2Q91Y00 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Gm13689-201ENSMUST00000119360 685 ntBASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb2Q91Y00 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.32□□□□□ -0.12
Pcdhb2Q91Y00 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb2Q91Y00 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb2Q91Y00 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb2Q91Y00 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb2Q91Y00 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb2Q91Y00 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb2Q91Y00 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms