Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Gm24420-201ENSMUST00000176676 59 ntBASIC15.52■□□□□ 0.08
Ddx41Q91VN6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ddx41Q91VN6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx41Q91VN6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx41Q91VN6 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ddx41Q91VN6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx41Q91VN6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx41Q91VN6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx41Q91VN6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx41Q91VN6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Ddx41Q91VN6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx41Q91VN6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ddx41Q91VN6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ddx41Q91VN6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Gm11524-201ENSMUST00000119349 807 ntBASIC15.51■□□□□ 0.07
Ddx41Q91VN6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Gm6266-201ENSMUST00000203844 806 ntBASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Mir497b-201ENSMUST00000093601 125 ntBASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Ddx41Q91VN6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Ddx41Q91VN6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx41Q91VN6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms