Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh18Q8VHR0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Gm27494-201ENSMUST00000184735 189 ntBASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Gm37935-201ENSMUST00000192012 982 ntBASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Gm5867-201ENSMUST00000063197 592 ntBASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.05□□□□□ -0.32
Pcdh18Q8VHR0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Mir1895-201ENSMUST00000122615 79 ntBASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.04□□□□□ -0.32
Pcdh18Q8VHR0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms