Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rnf8Q8VC56 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Gm13223-201ENSMUST00000118609 747 ntBASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Gm9229-201ENSMUST00000222777 126 ntBASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Shd-206ENSMUST00000225145 998 ntBASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Rnf8Q8VC56 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms