Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Gm11780-201ENSMUST00000136880 516 ntBASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Gm36957-201ENSMUST00000192982 2824 ntBASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc9Q8VC31 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Daam2-202ENSMUST00000224595 1926 ntBASIC16.21■□□□□ 0.19
Ccdc9Q8VC31 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc9Q8VC31 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC16.21■□□□□ 0.18
Ccdc9Q8VC31 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ccdc9Q8VC31 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc9Q8VC31 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc9Q8VC31 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc9Q8VC31 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc9Q8VC31 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc9Q8VC31 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc9Q8VC31 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc9Q8VC31 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms