Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Gm8805-201ENSMUST00000117848 313 ntBASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Gm13350-201ENSMUST00000120519 479 ntBASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Gm13342-201ENSMUST00000121055 207 ntBASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp7Q8R1T1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp7Q8R1T1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Gm7584-201ENSMUST00000175829 940 ntBASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Gm44364-201ENSMUST00000198368 141 ntBASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Gm7783-201ENSMUST00000204795 781 ntBASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Olfr284-202ENSMUST00000206647 966 ntBASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp7Q8R1T1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Gm27243-201ENSMUST00000183964 521 ntBASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp7Q8R1T1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Gm29396-201ENSMUST00000185659 716 ntBASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Gm9368-201ENSMUST00000219348 831 ntBASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms