Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Gm13392-201ENSMUST00000117708 150 ntBASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Rab11fip3Q8CHD8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Gm2231-201ENSMUST00000125661 612 ntBASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Gm27682-201ENSMUST00000183930 110 ntBASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab11fip3Q8CHD8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip3Q8CHD8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rab11fip3Q8CHD8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Rab11fip3Q8CHD8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Gm5187-201ENSMUST00000117317 991 ntBASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Gm13369-201ENSMUST00000119442 987 ntBASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms