Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcpip1Q8CDG3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Gm13223-201ENSMUST00000118609 747 ntBASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Gm13385-201ENSMUST00000121089 220 ntBASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Mir8102-201ENSMUST00000184148 139 ntBASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vcpip1Q8CDG3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Gm6912-201ENSMUST00000117218 544 ntBASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Gm14127-201ENSMUST00000117906 678 ntBASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Gm13453-201ENSMUST00000118708 357 ntBASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Gm38294-201ENSMUST00000192831 381 ntBASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vcpip1Q8CDG3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms