Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shisa4Q8CA71 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm15198-201ENSMUST00000117283 177 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm10478-201ENSMUST00000084451 396 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm6091-201ENSMUST00000098307 165 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shisa4Q8CA71 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Gm11814-201ENSMUST00000119515 929 ntBASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Shisa4Q8CA71 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Gm13226-201ENSMUST00000117838 404 ntBASIC15.59■□□□□ 0.09
Shisa4Q8CA71 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Shisa4Q8CA71 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms