Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtp1Q8C8C1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtp1Q8C8C1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtp1Q8C8C1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtp1Q8C8C1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtp1Q8C8C1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtp1Q8C8C1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rtp1Q8C8C1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rtp1Q8C8C1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.33■□□□□ 0.05
Rtp1Q8C8C1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtp1Q8C8C1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtp1Q8C8C1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Gm14277-201ENSMUST00000121195 360 ntBASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtp1Q8C8C1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Gm14726-201ENSMUST00000120623 896 ntBASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtp1Q8C8C1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Gm12217-201ENSMUST00000118858 696 ntBASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms