Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Syt7-205ENSMUST00000224135 1557 ntBASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Gm18041-201ENSMUST00000218210 618 ntBASIC14.9□□□□□ -0.02
Trim9Q8C7M3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim9Q8C7M3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Gm27437-201ENSMUST00000183429 107 ntBASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Gm29608-201ENSMUST00000190444 463 ntBASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Gm10576-201ENSMUST00000191927 825 ntBASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Gm38144-201ENSMUST00000192790 465 ntBASIC14.89□□□□□ -0.03
Trim9Q8C7M3 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Gm2423-201ENSMUST00000074863 733 ntBASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim9Q8C7M3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Gm19220-201ENSMUST00000222682 803 ntBASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms