Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tsen54Q8C2A2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Rprl2-201ENSMUST00000157150 290 ntBASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Gm9182-201ENSMUST00000217829 639 ntBASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tsen54Q8C2A2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Syt7-205ENSMUST00000224135 1557 ntBASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tsen54Q8C2A2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms