Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim4Q8C1Q6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Grk6-205ENSMUST00000224653 2976 ntBASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim4Q8C1Q6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Gm3436-201ENSMUST00000179930 840 ntBASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Smim4Q8C1Q6 Gm10766-202ENSMUST00000194123 606 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms