Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Gm10012-201ENSMUST00000078252 192 ntBASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim47Q8C0E3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Gm5687-201ENSMUST00000118252 640 ntBASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Gm43433-201ENSMUST00000196573 481 ntBASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.96□□□□□ -0.01
Trim47Q8C0E3 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim47Q8C0E3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim47Q8C0E3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Trim47Q8C0E3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim47Q8C0E3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim47Q8C0E3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim47Q8C0E3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim47Q8C0E3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim47Q8C0E3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim47Q8C0E3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Gm13829-201ENSMUST00000119600 138 ntBASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim47Q8C0E3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim47Q8C0E3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim47Q8C0E3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim47Q8C0E3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim47Q8C0E3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim47Q8C0E3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim47Q8C0E3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim47Q8C0E3 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.94□□□□□ -0.02
Trim47Q8C0E3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms