Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Gm4271-201ENSMUST00000174444 973 ntBASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Gm5370-201ENSMUST00000187187 574 ntBASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Gm42693-201ENSMUST00000196779 631 ntBASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.66□□□□□ -0.22
Sh3rf2Q8BZT2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Gm16372-201ENSMUST00000073088 450 ntBASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sh3rf2Q8BZT2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.64□□□□□ -0.23
Sh3rf2Q8BZT2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms