Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.93□□□□□ -0.5
SprnQ8BWU1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Gm24158-201ENSMUST00000175263 71 ntBASIC11.93□□□□□ -0.5
SprnQ8BWU1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.93□□□□□ -0.5
SprnQ8BWU1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.93□□□□□ -0.5
SprnQ8BWU1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SprnQ8BWU1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.93□□□□□ -0.5
SprnQ8BWU1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.93□□□□□ -0.5
SprnQ8BWU1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm22065-201ENSMUST00000103753 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm22066-201ENSMUST00000103761 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm24932-201ENSMUST00000103763 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm24115-201ENSMUST00000103799 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm22190-201ENSMUST00000103827 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm22191-201ENSMUST00000103831 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm24721-201ENSMUST00000103849 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm28018-201ENSMUST00000103869 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm26399-201ENSMUST00000103937 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm18737-201ENSMUST00000173594 937 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm25349-201ENSMUST00000177728 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm23616-201ENSMUST00000177797 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm25871-201ENSMUST00000177816 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm24752-201ENSMUST00000178240 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm24496-201ENSMUST00000178287 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm25649-201ENSMUST00000178476 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm25548-201ENSMUST00000178681 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm23147-201ENSMUST00000178841 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm26095-201ENSMUST00000179270 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm22171-201ENSMUST00000179283 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm23936-201ENSMUST00000179354 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm22619-201ENSMUST00000179516 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm25255-201ENSMUST00000179579 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm24755-201ENSMUST00000179691 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm26506-201ENSMUST00000179692 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm25086-201ENSMUST00000179931 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm23243-201ENSMUST00000180047 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm24659-201ENSMUST00000180212 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm24169-201ENSMUST00000180244 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm23689-201ENSMUST00000180354 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm27359-201ENSMUST00000184153 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm27785-201ENSMUST00000184268 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm27466-201ENSMUST00000184396 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm27703-201ENSMUST00000184836 110 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 Mir125a-201ENSMUST00000083545 68 ntBASIC11.92□□□□□ -0.5
SprnQ8BWU1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SprnQ8BWU1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms