Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Gm7488-201ENSMUST00000117148 684 ntBASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cpsf4Q8BQZ5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Gm21470-201ENSMUST00000187680 696 ntBASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Gm37714-201ENSMUST00000194742 342 ntBASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Gm42612-201ENSMUST00000197986 623 ntBASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Gm43170-201ENSMUST00000199827 612 ntBASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpsf4Q8BQZ5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms