Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn3Q8BHH8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gm14057-201ENSMUST00000120631 482 ntBASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gm25925-201ENSMUST00000158314 306 ntBASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gm8927-201ENSMUST00000181978 981 ntBASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gm3222-201ENSMUST00000071282 990 ntBASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn3Q8BHH8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clrn3Q8BHH8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms