Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Depdc1bQ8BH88 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Depdc1bQ8BH88 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Depdc1bQ8BH88 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Depdc1bQ8BH88 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Depdc1bQ8BH88 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Depdc1bQ8BH88 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Gm13385-201ENSMUST00000121089 220 ntBASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Gm45668-201ENSMUST00000211271 493 ntBASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Depdc1bQ8BH88 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Gm10766-202ENSMUST00000194123 606 ntBASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Depdc1bQ8BH88 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Gm12091-201ENSMUST00000146791 830 ntBASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Gm5425-201ENSMUST00000214125 459 ntBASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Gm19220-201ENSMUST00000222682 803 ntBASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Depdc1bQ8BH88 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms