Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Gm12485-201ENSMUST00000119641 291 ntBASIC13.35□□□□□ -0.27
Ubp1Q811S7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Mir6392-201ENSMUST00000184924 108 ntBASIC13.35□□□□□ -0.27
Ubp1Q811S7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Matn2-206ENSMUST00000228570 2798 ntBASIC13.35□□□□□ -0.27
Ubp1Q811S7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.35□□□□□ -0.27
Ubp1Q811S7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ubp1Q811S7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Gm15770-201ENSMUST00000117498 584 ntBASIC13.34□□□□□ -0.27
Ubp1Q811S7 Gm15376-201ENSMUST00000122258 783 ntBASIC13.34□□□□□ -0.27
Ubp1Q811S7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.34□□□□□ -0.27
Ubp1Q811S7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.34□□□□□ -0.27
Ubp1Q811S7 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.34□□□□□ -0.27
Ubp1Q811S7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Gm18624-201ENSMUST00000220966 658 ntBASIC13.34□□□□□ -0.27
Ubp1Q811S7 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.34□□□□□ -0.27
Ubp1Q811S7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.34□□□□□ -0.27
Ubp1Q811S7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ubp1Q811S7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ubp1Q811S7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ubp1Q811S7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ubp1Q811S7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Ubp1Q811S7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gm11524-201ENSMUST00000119349 807 ntBASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gm12341-201ENSMUST00000119724 503 ntBASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gm14928-201ENSMUST00000120198 477 ntBASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ubp1Q811S7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms