Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc116Q80X53 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Gm15770-201ENSMUST00000117498 584 ntBASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Gm17795-201ENSMUST00000214505 757 ntBASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc116Q80X53 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc116Q80X53 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Gm15678-201ENSMUST00000117573 960 ntBASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Ccdc116Q80X53 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms