Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.5□□□□□ -0.41
Pif1Q80SX8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.5□□□□□ -0.41
Pif1Q80SX8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Mir1247-201ENSMUST00000116706 82 ntBASIC12.5□□□□□ -0.41
Pif1Q80SX8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Gm5370-201ENSMUST00000187187 574 ntBASIC12.5□□□□□ -0.41
Pif1Q80SX8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.5□□□□□ -0.41
Pif1Q80SX8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.5□□□□□ -0.41
Pif1Q80SX8 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.5□□□□□ -0.41
Pif1Q80SX8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pif1Q80SX8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gm15198-201ENSMUST00000117283 177 ntBASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gm11803-201ENSMUST00000119966 444 ntBASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gm8584-201ENSMUST00000171982 758 ntBASIC12.49□□□□□ -0.41
Pif1Q80SX8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gm24447-201ENSMUST00000083977 338 ntBASIC12.49□□□□□ -0.41
Pif1Q80SX8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pif1Q80SX8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pif1Q80SX8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.48□□□□□ -0.41
Pif1Q80SX8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms