Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rad54bQ6PFE3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rad54bQ6PFE3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rad54bQ6PFE3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rad54bQ6PFE3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rad54bQ6PFE3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rad54bQ6PFE3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rad54bQ6PFE3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Gm14767-201ENSMUST00000121559 586 ntBASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rad54bQ6PFE3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Gm17330-201ENSMUST00000221047 165 ntBASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rad54bQ6PFE3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.6□□□□□ -0.23
Rad54bQ6PFE3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms