Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VclQ64727 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VclQ64727 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VclQ64727 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VclQ64727 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VclQ64727 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
VclQ64727 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.29□□□□□ -0.28
VclQ64727 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
VclQ64727 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
VclQ64727 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VclQ64727 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.29□□□□□ -0.28
VclQ64727 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.29□□□□□ -0.28
VclQ64727 Gm15376-201ENSMUST00000122258 783 ntBASIC13.29□□□□□ -0.28
VclQ64727 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.29□□□□□ -0.28
VclQ64727 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Gm5745-201ENSMUST00000183748 313 ntBASIC13.29□□□□□ -0.28
VclQ64727 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.29□□□□□ -0.28
VclQ64727 Gm38223-201ENSMUST00000194484 695 ntBASIC13.29□□□□□ -0.28
VclQ64727 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.29□□□□□ -0.28
VclQ64727 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.29□□□□□ -0.28
VclQ64727 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.29□□□□□ -0.28
VclQ64727 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VclQ64727 Gm24447-201ENSMUST00000083977 338 ntBASIC13.29□□□□□ -0.28
VclQ64727 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.29□□□□□ -0.28
VclQ64727 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
VclQ64727 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.29□□□□□ -0.28
VclQ64727 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
VclQ64727 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
VclQ64727 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VclQ64727 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VclQ64727 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
VclQ64727 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
VclQ64727 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.28□□□□□ -0.28
VclQ64727 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.28□□□□□ -0.28
VclQ64727 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.28□□□□□ -0.28
VclQ64727 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VclQ64727 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VclQ64727 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VclQ64727 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Gm28911-201ENSMUST00000188837 117 ntBASIC13.28□□□□□ -0.28
VclQ64727 Gm45384-201ENSMUST00000210451 277 ntBASIC13.28□□□□□ -0.28
VclQ64727 Gm17330-201ENSMUST00000221047 165 ntBASIC13.28□□□□□ -0.28
VclQ64727 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
VclQ64727 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
VclQ64727 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.28□□□□□ -0.28
VclQ64727 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VclQ64727 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VclQ64727 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VclQ64727 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VclQ64727 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VclQ64727 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.27□□□□□ -0.28
VclQ64727 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VclQ64727 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VclQ64727 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VclQ64727 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VclQ64727 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms