Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
Ss18Q62280 Gm5566-201ENSMUST00000116118 459 ntBASIC9.98□□□□□ -0.81
Ss18Q62280 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC9.98□□□□□ -0.81
Ss18Q62280 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Ss18Q62280 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Ss18Q62280 Gm2445-201ENSMUST00000182798 989 ntBASIC9.98□□□□□ -0.81
Ss18Q62280 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC9.98□□□□□ -0.81
Ss18Q62280 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Gm43575-201ENSMUST00000196420 516 ntBASIC9.98□□□□□ -0.81
Ss18Q62280 Gm44335-201ENSMUST00000196879 141 ntBASIC9.98□□□□□ -0.81
Ss18Q62280 Gm44297-201ENSMUST00000198304 141 ntBASIC9.98□□□□□ -0.81
Ss18Q62280 Gm44346-201ENSMUST00000198851 141 ntBASIC9.98□□□□□ -0.81
Ss18Q62280 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ss18Q62280 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 AC121804.3-201ENSMUST00000223420 295 ntBASIC9.98□□□□□ -0.81
Ss18Q62280 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ss18Q62280 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC9.98□□□□□ -0.81
Ss18Q62280 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ss18Q62280 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC9.98□□□□□ -0.81
Ss18Q62280 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Ss18Q62280 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.97□□□□□ -0.81
Ss18Q62280 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ss18Q62280 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC9.97□□□□□ -0.81
Ss18Q62280 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ss18Q62280 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Gm8410-201ENSMUST00000117225 605 ntBASIC9.97□□□□□ -0.81
Ss18Q62280 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC9.97□□□□□ -0.81
Ss18Q62280 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC9.97□□□□□ -0.81
Ss18Q62280 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.97□□□□□ -0.81
Ss18Q62280 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Ss18Q62280 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Ss18Q62280 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ss18Q62280 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ss18Q62280 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.97□□□□□ -0.81
Ss18Q62280 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ss18Q62280 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Ss18Q62280 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC9.96□□□□□ -0.81
Ss18Q62280 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ss18Q62280 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms