Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.19□□□□□ -0.3
Vsx2Q61412 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.19□□□□□ -0.3
Vsx2Q61412 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.19□□□□□ -0.3
Vsx2Q61412 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vsx2Q61412 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Vsx2Q61412 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Gm29741-201ENSMUST00000192667 421 ntBASIC13.19□□□□□ -0.3
Vsx2Q61412 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.19□□□□□ -0.3
Vsx2Q61412 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.19□□□□□ -0.3
Vsx2Q61412 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vsx2Q61412 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.19□□□□□ -0.3
Vsx2Q61412 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.19□□□□□ -0.3
Vsx2Q61412 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.19□□□□□ -0.3
Vsx2Q61412 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.19□□□□□ -0.3
Vsx2Q61412 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Vsx2Q61412 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Vsx2Q61412 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vsx2Q61412 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.19□□□□□ -0.3
Vsx2Q61412 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.18□□□□□ -0.3
Vsx2Q61412 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.18□□□□□ -0.3
Vsx2Q61412 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.18□□□□□ -0.3
Vsx2Q61412 Gm8927-201ENSMUST00000181978 981 ntBASIC13.18□□□□□ -0.3
Vsx2Q61412 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.18□□□□□ -0.3
Vsx2Q61412 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.18□□□□□ -0.3
Vsx2Q61412 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.18□□□□□ -0.3
Vsx2Q61412 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vsx2Q61412 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Gm3222-201ENSMUST00000071282 990 ntBASIC13.18□□□□□ -0.3
Vsx2Q61412 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vsx2Q61412 Mir497b-201ENSMUST00000093601 125 ntBASIC13.18□□□□□ -0.3
Vsx2Q61412 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vsx2Q61412 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vsx2Q61412 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vsx2Q61412 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vsx2Q61412 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx2Q61412 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.18□□□□□ -0.3
Vsx2Q61412 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Vsx2Q61412 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.17□□□□□ -0.3
Vsx2Q61412 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vsx2Q61412 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vsx2Q61412 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Gm13385-201ENSMUST00000121089 220 ntBASIC13.17□□□□□ -0.3
Vsx2Q61412 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Vsx2Q61412 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.17□□□□□ -0.3
Vsx2Q61412 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.17□□□□□ -0.3
Vsx2Q61412 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms