Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.02□□□□□ -0.32
Col12a1Q60847 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Col12a1Q60847 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Col12a1Q60847 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Col12a1Q60847 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col12a1Q60847 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col12a1Q60847 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.02□□□□□ -0.33
Col12a1Q60847 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.02□□□□□ -0.33
Col12a1Q60847 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col12a1Q60847 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.02□□□□□ -0.33
Col12a1Q60847 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col12a1Q60847 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Gm12015-201ENSMUST00000117065 843 ntBASIC13.02□□□□□ -0.33
Col12a1Q60847 Gm12266-201ENSMUST00000120311 962 ntBASIC13.02□□□□□ -0.33
Col12a1Q60847 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.02□□□□□ -0.33
Col12a1Q60847 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.02□□□□□ -0.33
Col12a1Q60847 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Col12a1Q60847 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col12a1Q60847 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col12a1Q60847 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.01□□□□□ -0.33
Col12a1Q60847 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.01□□□□□ -0.33
Col12a1Q60847 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Gm13888-201ENSMUST00000119148 422 ntBASIC13.01□□□□□ -0.33
Col12a1Q60847 Gm11450-201ENSMUST00000121144 333 ntBASIC13.01□□□□□ -0.33
Col12a1Q60847 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.01□□□□□ -0.33
Col12a1Q60847 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.01□□□□□ -0.33
Col12a1Q60847 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.01□□□□□ -0.33
Col12a1Q60847 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col12a1Q60847 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.01□□□□□ -0.33
Col12a1Q60847 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Gm12899-201ENSMUST00000120565 551 ntBASIC13.01□□□□□ -0.33
Col12a1Q60847 Gm23153-201ENSMUST00000175323 313 ntBASIC13.01□□□□□ -0.33
Col12a1Q60847 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.01□□□□□ -0.33
Col12a1Q60847 Gm18730-201ENSMUST00000218038 343 ntBASIC13.01□□□□□ -0.33
Col12a1Q60847 Gm10076-201ENSMUST00000073238 384 ntBASIC13.01□□□□□ -0.33
Col12a1Q60847 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.01□□□□□ -0.33
Col12a1Q60847 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col12a1Q60847 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13□□□□□ -0.33
Col12a1Q60847 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Gm11801-201ENSMUST00000117807 746 ntBASIC13□□□□□ -0.33
Col12a1Q60847 Gm6039-201ENSMUST00000121667 1250 ntBASIC13□□□□□ -0.33
Col12a1Q60847 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col12a1Q60847 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col12a1Q60847 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col12a1Q60847 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Col12a1Q60847 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13□□□□□ -0.33
Col12a1Q60847 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13□□□□□ -0.33
Col12a1Q60847 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13□□□□□ -0.33
Col12a1Q60847 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col12a1Q60847 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col12a1Q60847 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13□□□□□ -0.33
Col12a1Q60847 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13□□□□□ -0.33
Col12a1Q60847 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Col12a1Q60847 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col12a1Q60847 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col12a1Q60847 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms