Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Foxd4Q60688 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd4Q60688 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd4Q60688 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.1□□□□□ -0.15
Foxd4Q60688 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Foxd4Q60688 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd4Q60688 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd4Q60688 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Foxd4Q60688 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Foxd4Q60688 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.09□□□□□ -0.15
Foxd4Q60688 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Foxd4Q60688 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Foxd4Q60688 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.09□□□□□ -0.15
Foxd4Q60688 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.09□□□□□ -0.15
Foxd4Q60688 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC14.09□□□□□ -0.15
Foxd4Q60688 Gm43058-201ENSMUST00000197645 625 ntBASIC14.09□□□□□ -0.15
Foxd4Q60688 Gm18660-201ENSMUST00000199542 629 ntBASIC14.09□□□□□ -0.15
Foxd4Q60688 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.09□□□□□ -0.15
Foxd4Q60688 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.09□□□□□ -0.15
Foxd4Q60688 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Foxd4Q60688 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Foxd4Q60688 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.09□□□□□ -0.15
Foxd4Q60688 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.09□□□□□ -0.15
Foxd4Q60688 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Foxd4Q60688 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Foxd4Q60688 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Foxd4Q60688 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Foxd4Q60688 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Foxd4Q60688 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Foxd4Q60688 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd4Q60688 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd4Q60688 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Foxd4Q60688 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd4Q60688 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd4Q60688 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd4Q60688 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd4Q60688 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd4Q60688 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.08□□□□□ -0.16
Foxd4Q60688 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.08□□□□□ -0.16
Foxd4Q60688 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Foxd4Q60688 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd4Q60688 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd4Q60688 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm8988-201ENSMUST00000155015 1240 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.08□□□□□ -0.16
Foxd4Q60688 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Foxd4Q60688 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm29310-201ENSMUST00000185468 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21825-201ENSMUST00000185728 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm29109-201ENSMUST00000185895 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21896-201ENSMUST00000186520 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21873-201ENSMUST00000186728 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21794-201ENSMUST00000187056 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21880-201ENSMUST00000187275 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21826-201ENSMUST00000187451 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21198-201ENSMUST00000188393 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21749-201ENSMUST00000189343 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21901-201ENSMUST00000189568 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm29424-201ENSMUST00000189716 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm28599-201ENSMUST00000189838 694 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21867-201ENSMUST00000189917 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm29269-201ENSMUST00000190087 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21722-201ENSMUST00000190153 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm28423-201ENSMUST00000190701 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21899-201ENSMUST00000190745 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm17983-201ENSMUST00000190766 594 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21910-201ENSMUST00000191163 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21849-201ENSMUST00000191571 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm28678-201ENSMUST00000191593 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm20910-201ENSMUST00000193268 696 ntBASIC14.08□□□□□ -0.16
Foxd4Q60688 Gm21871-201ENSMUST00000194621 696 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms