Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Gm7230-201ENSMUST00000173026 815 ntBASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Birc2-201ENSMUST00000054878 378 ntBASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav3-3Q5R1C3 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Gm2451-201ENSMUST00000199447 999 ntBASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Gm10290-201ENSMUST00000200451 999 ntBASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav3-3Q5R1C3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms