Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.37□□□□□ -0.11
Syne3Q4FZC9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Syne3Q4FZC9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Gm24420-201ENSMUST00000176676 59 ntBASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Gm5866-201ENSMUST00000177881 973 ntBASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Gm44855-201ENSMUST00000205725 362 ntBASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Syne3Q4FZC9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Syt7-205ENSMUST00000224135 1557 ntBASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Gm17795-201ENSMUST00000214505 757 ntBASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Syne3Q4FZC9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Gm21854-201ENSMUST00000179901 471 ntBASIC14.34□□□□□ -0.11
Syne3Q4FZC9 Gm28760-201ENSMUST00000185995 736 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms