Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim80Q3V061 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14□□□□□ -0.17
Trim80Q3V061 Gm43677-201ENSMUST00000198098 2378 ntBASIC14□□□□□ -0.17
Trim80Q3V061 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14□□□□□ -0.17
Trim80Q3V061 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14□□□□□ -0.17
Trim80Q3V061 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14□□□□□ -0.17
Trim80Q3V061 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Gm45098-201ENSMUST00000207179 657 ntBASIC14□□□□□ -0.17
Trim80Q3V061 AC166341.4-201ENSMUST00000220625 123 ntBASIC14□□□□□ -0.17
Trim80Q3V061 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14□□□□□ -0.17
Trim80Q3V061 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Gm43061-201ENSMUST00000198850 2241 ntBASIC14□□□□□ -0.17
Trim80Q3V061 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trim80Q3V061 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim80Q3V061 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim80Q3V061 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim80Q3V061 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Trim80Q3V061 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.99□□□□□ -0.17
Trim80Q3V061 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim80Q3V061 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim80Q3V061 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim80Q3V061 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Mir7684-201ENSMUST00000183858 60 ntBASIC13.99□□□□□ -0.17
Trim80Q3V061 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim80Q3V061 Gm38225-201ENSMUST00000194001 393 ntBASIC13.99□□□□□ -0.17
Trim80Q3V061 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.99□□□□□ -0.17
Trim80Q3V061 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim80Q3V061 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.99□□□□□ -0.17
Trim80Q3V061 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim80Q3V061 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
Trim80Q3V061 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim80Q3V061 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Pck2-205ENSMUST00000226352 2784 ntBASIC13.99□□□□□ -0.17
Trim80Q3V061 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim80Q3V061 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim80Q3V061 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.98□□□□□ -0.17
Trim80Q3V061 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim80Q3V061 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim80Q3V061 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim80Q3V061 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Gm13453-201ENSMUST00000118708 357 ntBASIC13.98□□□□□ -0.17
Trim80Q3V061 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim80Q3V061 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim80Q3V061 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms