Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm24755-201ENSMUST00000179691 110 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gm26506-201ENSMUST00000179692 110 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gm25086-201ENSMUST00000179931 110 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gm23243-201ENSMUST00000180047 110 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gm24659-201ENSMUST00000180212 110 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gm24169-201ENSMUST00000180244 110 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gm23689-201ENSMUST00000180354 110 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gm27359-201ENSMUST00000184153 110 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gm27785-201ENSMUST00000184268 110 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gm27466-201ENSMUST00000184396 110 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gm27703-201ENSMUST00000184836 110 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shisa3Q3UPR0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Mir449b-201ENSMUST00000104833 80 ntBASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Gm7774-201ENSMUST00000200064 533 ntBASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Shisa3Q3UPR0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Gm29741-201ENSMUST00000192667 421 ntBASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Gm10253-201ENSMUST00000194270 940 ntBASIC11.67□□□□□ -0.54
Shisa3Q3UPR0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms