Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Puf60Q3UEB3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Puf60Q3UEB3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Gm15370-201ENSMUST00000117158 253 ntBASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Gm13297-201ENSMUST00000120205 934 ntBASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Gm26185-201ENSMUST00000157692 266 ntBASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Gm6621-201ENSMUST00000193251 772 ntBASIC18.42■□□□□ 0.54
Puf60Q3UEB3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Gm7046-201ENSMUST00000221351 977 ntBASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Puf60Q3UEB3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Gm37133-201ENSMUST00000192705 1922 ntBASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Gm43056-201ENSMUST00000197865 2791 ntBASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Puf60Q3UEB3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Gm2991-201ENSMUST00000173338 480 ntBASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Gm37042-201ENSMUST00000193816 581 ntBASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Puf60Q3UEB3 Tmed9-203ENSMUST00000224741 1450 ntBASIC18.39■□□□□ 0.54
Puf60Q3UEB3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Puf60Q3UEB3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Puf60Q3UEB3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Gm5637-201ENSMUST00000153890 1119 ntBASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Gm7118-201ENSMUST00000200167 1003 ntBASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC18.39■□□□□ 0.53
Puf60Q3UEB3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Gm28182-201ENSMUST00000188354 2477 ntBASIC18.39■□□□□ 0.53
Puf60Q3UEB3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Puf60Q3UEB3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms