Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Brf2Q3UAW9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Gm12151-201ENSMUST00000121374 290 ntBASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Gm27838-201ENSMUST00000184829 128 ntBASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Brf2Q3UAW9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.72□□□□□ -0.37
Brf2Q3UAW9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.72□□□□□ -0.37
Brf2Q3UAW9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Brf2Q3UAW9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms