Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm12856-201ENSMUST00000119471 1293 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Ighv5-11-201ENSMUST00000193354 371 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm37458-201ENSMUST00000194055 410 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 AC159810.1-201ENSMUST00000214838 1480 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm14704-201ENSMUST00000120300 874 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm22442-201ENSMUST00000157256 144 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm44772-201ENSMUST00000207623 1191 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm18123-201ENSMUST00000210874 822 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Nupl1-207ENSMUST00000225311 2475 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm38197-201ENSMUST00000192320 2122 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm15635-204ENSMUST00000208024 2539 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm4654-201ENSMUST00000183305 982 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm270-201ENSMUST00000223010 976 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 n-R5s185-201ENSMUST00000083953 119 ntBASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ush2AQ2QI47 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm13328-201ENSMUST00000120816 1020 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm22846-201ENSMUST00000157706 270 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm5700-201ENSMUST00000191483 989 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm17827-201ENSMUST00000211825 742 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm11956-201ENSMUST00000119525 512 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm22388-201ENSMUST00000158194 248 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Mir7677-201ENSMUST00000184226 67 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm37197-201ENSMUST00000195607 401 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm45925-201ENSMUST00000218882 744 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 AC126549.2-201ENSMUST00000223997 1976 ntBASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ush2AQ2QI47 Gm11839-201ENSMUST00000120647 1953 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms