Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Tff1Q08423 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Tff1Q08423 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Tff1Q08423 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.25□□□□□ -0.61
Tff1Q08423 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.25□□□□□ -0.61
Tff1Q08423 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Gm18766-201ENSMUST00000189811 808 ntBASIC11.25□□□□□ -0.61
Tff1Q08423 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Gm18027-201ENSMUST00000218947 619 ntBASIC11.25□□□□□ -0.61
Tff1Q08423 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.25□□□□□ -0.61
Tff1Q08423 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.25□□□□□ -0.61
Tff1Q08423 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Tff1Q08423 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.25□□□□□ -0.61
Tff1Q08423 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Tff1Q08423 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.25□□□□□ -0.61
Tff1Q08423 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.25□□□□□ -0.61
Tff1Q08423 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.25□□□□□ -0.61
Tff1Q08423 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tff1Q08423 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.24□□□□□ -0.61
Tff1Q08423 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.24□□□□□ -0.61
Tff1Q08423 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.24□□□□□ -0.61
Tff1Q08423 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.24□□□□□ -0.61
Tff1Q08423 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.24□□□□□ -0.61
Tff1Q08423 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Gm43433-201ENSMUST00000196573 481 ntBASIC11.24□□□□□ -0.61
Tff1Q08423 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tff1Q08423 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tff1Q08423 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.23□□□□□ -0.61
Tff1Q08423 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
Tff1Q08423 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Tff1Q08423 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tff1Q08423 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms