Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col17a1Q07563 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col17a1Q07563 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col17a1Q07563 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col17a1Q07563 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col17a1Q07563 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC20.25■□□□□ 0.83
Col17a1Q07563 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Gm16071-201ENSMUST00000119589 793 ntBASIC20.24■□□□□ 0.83
Col17a1Q07563 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC20.24■□□□□ 0.83
Col17a1Q07563 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Gm17826-201ENSMUST00000189720 798 ntBASIC20.24■□□□□ 0.83
Col17a1Q07563 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC20.24■□□□□ 0.83
Col17a1Q07563 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC20.24■□□□□ 0.83
Col17a1Q07563 CT025553.1-201ENSMUST00000226292 299 ntBASIC20.24■□□□□ 0.83
Col17a1Q07563 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Col17a1Q07563 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Col17a1Q07563 Gm22144-201ENSMUST00000157402 102 ntBASIC20.24■□□□□ 0.83
Col17a1Q07563 Gm26989-201ENSMUST00000182608 749 ntBASIC20.24■□□□□ 0.83
Col17a1Q07563 Gm5100-201ENSMUST00000195631 589 ntBASIC20.24■□□□□ 0.83
Col17a1Q07563 Gm35960-201ENSMUST00000202712 767 ntBASIC20.24■□□□□ 0.83
Col17a1Q07563 AC166051.1-201ENSMUST00000214313 210 ntBASIC20.24■□□□□ 0.83
Col17a1Q07563 Lgi3-203ENSMUST00000226548 1001 ntBASIC20.24■□□□□ 0.83
Col17a1Q07563 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Col17a1Q07563 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col17a1Q07563 Gm9361-201ENSMUST00000198695 1507 ntBASIC20.24■□□□□ 0.83
Col17a1Q07563 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col17a1Q07563 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Col17a1Q07563 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Col17a1Q07563 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Col17a1Q07563 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC20.23■□□□□ 0.83
Col17a1Q07563 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col17a1Q07563 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col17a1Q07563 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Col17a1Q07563 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Col17a1Q07563 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col17a1Q07563 Gm4726-201ENSMUST00000135604 736 ntBASIC20.23■□□□□ 0.83
Col17a1Q07563 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col17a1Q07563 Gm6019-201ENSMUST00000148369 736 ntBASIC20.23■□□□□ 0.83
Col17a1Q07563 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC20.23■□□□□ 0.83
Col17a1Q07563 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Col17a1Q07563 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col17a1Q07563 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col17a1Q07563 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col17a1Q07563 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Carlr-201ENSMUST00000181515 2574 ntBASIC20.22■□□□□ 0.83
Col17a1Q07563 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Col17a1Q07563 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Gm42632-201ENSMUST00000201707 2411 ntBASIC20.22■□□□□ 0.83
Col17a1Q07563 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Gm9166-201ENSMUST00000120293 561 ntBASIC20.22■□□□□ 0.83
Col17a1Q07563 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC20.22■□□□□ 0.83
Col17a1Q07563 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC20.22■□□□□ 0.83
Col17a1Q07563 Gm25998-201ENSMUST00000175397 53 ntBASIC20.22■□□□□ 0.83
Col17a1Q07563 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC20.22■□□□□ 0.83
Col17a1Q07563 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC20.22■□□□□ 0.83
Col17a1Q07563 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Col17a1Q07563 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC20.22■□□□□ 0.83
Col17a1Q07563 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col17a1Q07563 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Col17a1Q07563 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Col17a1Q07563 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Col17a1Q07563 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Col17a1Q07563 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
Col17a1Q07563 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col17a1Q07563 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms