Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Sox9Q04887 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sox9Q04887 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox9Q04887 Gm14350-201ENSMUST00000116642 640 ntBASIC13.91□□□□□ -0.18
Sox9Q04887 Gm24548-201ENSMUST00000158650 108 ntBASIC13.91□□□□□ -0.18
Sox9Q04887 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Sox9Q04887 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox9Q04887 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox9Q04887 Gm3508-201ENSMUST00000186012 792 ntBASIC13.91□□□□□ -0.18
Sox9Q04887 Gm37042-201ENSMUST00000193816 581 ntBASIC13.91□□□□□ -0.18
Sox9Q04887 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.91□□□□□ -0.18
Sox9Q04887 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.91□□□□□ -0.18
Sox9Q04887 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Sox9Q04887 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox9Q04887 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox9Q04887 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.91□□□□□ -0.18
Sox9Q04887 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox9Q04887 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.9□□□□□ -0.18
Sox9Q04887 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.9□□□□□ -0.18
Sox9Q04887 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox9Q04887 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Sox9Q04887 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox9Q04887 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.9□□□□□ -0.18
Sox9Q04887 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox9Q04887 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Gm26956-201ENSMUST00000182176 986 ntBASIC13.9□□□□□ -0.18
Sox9Q04887 Gm27023-201ENSMUST00000182372 285 ntBASIC13.9□□□□□ -0.18
Sox9Q04887 Gm44967-201ENSMUST00000207047 631 ntBASIC13.9□□□□□ -0.18
Sox9Q04887 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sox9Q04887 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.9□□□□□ -0.18
Sox9Q04887 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox9Q04887 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox9Q04887 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox9Q04887 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sox9Q04887 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sox9Q04887 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sox9Q04887 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sox9Q04887 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sox9Q04887 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.89□□□□□ -0.19
Sox9Q04887 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox9Q04887 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox9Q04887 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.89□□□□□ -0.19
Sox9Q04887 Mir1943-201ENSMUST00000158276 73 ntBASIC13.89□□□□□ -0.19
Sox9Q04887 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox9Q04887 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms