Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.09□□□□□ -0.31
Msx2Q03358 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.09□□□□□ -0.31
Msx2Q03358 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Msx2Q03358 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.09□□□□□ -0.31
Msx2Q03358 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.09□□□□□ -0.31
Msx2Q03358 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Msx2Q03358 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.09□□□□□ -0.31
Msx2Q03358 Gm6443-201ENSMUST00000203599 874 ntBASIC13.09□□□□□ -0.31
Msx2Q03358 Gm18057-201ENSMUST00000208220 503 ntBASIC13.09□□□□□ -0.31
Msx2Q03358 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.09□□□□□ -0.31
Msx2Q03358 Syt7-205ENSMUST00000224135 1557 ntBASIC13.09□□□□□ -0.31
Msx2Q03358 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.09□□□□□ -0.31
Msx2Q03358 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Msx2Q03358 Mir125a-201ENSMUST00000083545 68 ntBASIC13.09□□□□□ -0.31
Msx2Q03358 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Msx2Q03358 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.09□□□□□ -0.31
Msx2Q03358 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Msx2Q03358 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.09□□□□□ -0.31
Msx2Q03358 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Msx2Q03358 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Msx2Q03358 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Msx2Q03358 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx2Q03358 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Msx2Q03358 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Msx2Q03358 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.08□□□□□ -0.31
Msx2Q03358 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Msx2Q03358 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Msx2Q03358 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.08□□□□□ -0.32
Msx2Q03358 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Msx2Q03358 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.08□□□□□ -0.32
Msx2Q03358 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Msx2Q03358 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.08□□□□□ -0.32
Msx2Q03358 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.08□□□□□ -0.32
Msx2Q03358 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.08□□□□□ -0.32
Msx2Q03358 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.08□□□□□ -0.32
Msx2Q03358 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.08□□□□□ -0.32
Msx2Q03358 Gm42790-201ENSMUST00000201268 969 ntBASIC13.08□□□□□ -0.32
Msx2Q03358 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.08□□□□□ -0.32
Msx2Q03358 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.08□□□□□ -0.32
Msx2Q03358 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Msx2Q03358 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Msx2Q03358 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Msx2Q03358 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.08□□□□□ -0.32
Msx2Q03358 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx2Q03358 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx2Q03358 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx2Q03358 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx2Q03358 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.07□□□□□ -0.32
Msx2Q03358 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.07□□□□□ -0.32
Msx2Q03358 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
Msx2Q03358 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Msx2Q03358 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx2Q03358 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx2Q03358 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms