Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.15□□□□□ -0.3
Mmp11Q02853 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp11Q02853 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.15□□□□□ -0.3
Mmp11Q02853 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.15□□□□□ -0.3
Mmp11Q02853 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.15□□□□□ -0.3
Mmp11Q02853 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp11Q02853 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.15□□□□□ -0.3
Mmp11Q02853 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Mmp11Q02853 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp11Q02853 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.15□□□□□ -0.3
Mmp11Q02853 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Mmp11Q02853 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Mmp11Q02853 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp11Q02853 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Mmp11Q02853 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Mmp11Q02853 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.14□□□□□ -0.31
Mmp11Q02853 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Mmp11Q02853 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Mmp11Q02853 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.14□□□□□ -0.31
Mmp11Q02853 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.14□□□□□ -0.31
Mmp11Q02853 Gm12341-201ENSMUST00000119724 503 ntBASIC13.14□□□□□ -0.31
Mmp11Q02853 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.14□□□□□ -0.31
Mmp11Q02853 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.14□□□□□ -0.31
Mmp11Q02853 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.14□□□□□ -0.31
Mmp11Q02853 Gm37917-201ENSMUST00000194711 392 ntBASIC13.14□□□□□ -0.31
Mmp11Q02853 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.14□□□□□ -0.31
Mmp11Q02853 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.14□□□□□ -0.31
Mmp11Q02853 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Mmp11Q02853 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.14□□□□□ -0.31
Mmp11Q02853 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Mmp11Q02853 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Mmp11Q02853 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
Mmp11Q02853 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.14□□□□□ -0.31
Mmp11Q02853 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.14□□□□□ -0.31
Mmp11Q02853 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Mmp11Q02853 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Mmp11Q02853 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp11Q02853 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Mmp11Q02853 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Mmp11Q02853 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.13□□□□□ -0.31
Mmp11Q02853 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Mmp11Q02853 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.13□□□□□ -0.31
Mmp11Q02853 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Mmp11Q02853 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Mmp11Q02853 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms