Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.48□□□□□ -0.25
Col6a2Q02788 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col6a2Q02788 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col6a2Q02788 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col6a2Q02788 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.48□□□□□ -0.25
Col6a2Q02788 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a2Q02788 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Col6a2Q02788 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Col6a2Q02788 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a2Q02788 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col6a2Q02788 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Gm11425-201ENSMUST00000119608 498 ntBASIC13.47□□□□□ -0.25
Col6a2Q02788 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a2Q02788 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col6a2Q02788 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a2Q02788 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Col6a2Q02788 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a2Q02788 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Gm9396-201ENSMUST00000076703 567 ntBASIC13.47□□□□□ -0.25
Col6a2Q02788 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.47□□□□□ -0.25
Col6a2Q02788 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col6a2Q02788 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a2Q02788 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.46□□□□□ -0.25
Col6a2Q02788 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.46□□□□□ -0.25
Col6a2Q02788 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.46□□□□□ -0.25
Col6a2Q02788 Gm12390-201ENSMUST00000117897 397 ntBASIC13.46□□□□□ -0.25
Col6a2Q02788 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Col6a2Q02788 Gm13612-201ENSMUST00000119276 390 ntBASIC13.46□□□□□ -0.25
Col6a2Q02788 Gm11814-201ENSMUST00000119515 929 ntBASIC13.46□□□□□ -0.25
Col6a2Q02788 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a2Q02788 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms