Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Scn1bP97952 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1bP97952 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn1bP97952 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn1bP97952 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Scn1bP97952 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.33□□□□□ -0.44
Scn1bP97952 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.33□□□□□ -0.44
Scn1bP97952 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Scn1bP97952 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.33□□□□□ -0.44
Scn1bP97952 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.33□□□□□ -0.44
Scn1bP97952 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scn1bP97952 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.33□□□□□ -0.44
Scn1bP97952 Gm27741-201ENSMUST00000185060 237 ntBASIC12.33□□□□□ -0.44
Scn1bP97952 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.33□□□□□ -0.44
Scn1bP97952 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.33□□□□□ -0.44
Scn1bP97952 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.33□□□□□ -0.44
Scn1bP97952 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.33□□□□□ -0.44
Scn1bP97952 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.33□□□□□ -0.44
Scn1bP97952 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.33□□□□□ -0.44
Scn1bP97952 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.33□□□□□ -0.44
Scn1bP97952 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scn1bP97952 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Scn1bP97952 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scn1bP97952 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Scn1bP97952 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Scn1bP97952 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1bP97952 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Scn1bP97952 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Scn1bP97952 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn1bP97952 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Scn1bP97952 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn1bP97952 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.32□□□□□ -0.44
Scn1bP97952 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scn1bP97952 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Scn1bP97952 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.32□□□□□ -0.44
Scn1bP97952 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn1bP97952 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn1bP97952 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Scn1bP97952 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.32□□□□□ -0.44
Scn1bP97952 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn1bP97952 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1bP97952 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scn1bP97952 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1bP97952 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms